PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMP01077
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 170aa    MW: 18373.2 Da    PI: 10.4111
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMP01077genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.7e-1686148163
               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
               +ke kr +r+ +NR++A+  R+RKka++ eLe++vk Le++N++L ++l++l++e + l++ v
  OMP01077  86 DKENKRLKRLLRNRVSAQQARERKKAYLNELETRVKDLEKKNSELEERLSTLQNENQMLRQIV 148
               5899*****************************************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MQEQATSSIA ASSLPSSSER SSSSALQVEV KEGMESDEEI RRVPEIGGDA SVAPAAGREG  60
GSAAGPDRVQ PSGEGGPRKR GRSPADKENK RLKRLLRNRV SAQQARERKK AYLNELETRV  120
KDLEKKNSEL EERLSTLQNE NQMLRQIVKN TTASRRGGNG NSNSAADGTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17783PRKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.16e-52bZIP family protein