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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OMP04844 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 77aa MW: 8868.84 Da PI: 6.3361 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 12.1 | 0.00058 | 32 | 48 | 5 | 21 |
TTTEEESSHHHHHHHHH CS
zf-C2H2 5 dCgksFsrksnLkrHir 21
+Cg F++k +Lk Hi+
OMP04844 32 ICGSDFKHKRSLKDHIK 48
8**************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 77 aa Download sequence |
MYGIERKCDK AFVVKGDWRT HEKNCGKIWY CICGSDFKHK RSLKDHIKAF GSGHATFAND 60 SHSLEEDDDP TSEFDLD |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G57670.1 | 2e-32 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OMP04844 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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