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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OMP05343 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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| Family | WRKY | ||||||||
| Protein Properties | Length: 106aa MW: 12113.7 Da PI: 10.7435 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 34.1 | 5.3e-11 | 86 | 106 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefp 21
ldDgy+WrKYGqK vk+++fp
OMP05343 86 LDDGYRWRKYGQKAVKNNKFP 106
59*****************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 106 aa Download sequence |
MAPNSQVFNN FYGNSSNGFL GLRTENFIQK PEVKEIVQNG RFVGSSDEMI KSSAAGSGDI 60 GNNKRKEKKM RKPRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G13080.1 | 4e-20 | WRKY family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OMP05343 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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