PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMP06523

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 145aa MW: 16443.7 Da PI: 5.9915

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMP06523	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.4	2.4e-11	24	82	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR RK++++e L +++ +L++ N++ + ++ ++ + +++s + OMP06523 24 RKRKRMLSNRESARRSRMRKQKQLEDLVNEASALQKDNSRVSEAINVATQRYIEMESAN 82 57899*************************************99999888888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MAPAQKAASS GSDSDPRYAN VDERKRKRML SNRESARRSR MRKQKQLEDL VNEASALQKD 60 NSRVSEAINV ATQRYIEMES ANNVLRAQAM ELTERLRSLN SVLHIVEEVS GYDVEIPEIP 120 DPLLKPWQLP CPVQPIMASA DMFEC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	45	RKRKRMLSNRESARRSRMRKQK
2	37	44	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	2e-69	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMP06523