PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMP11637
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 116aa    MW: 13230.4 Da    PI: 4.9377
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMP11637genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.3e-11687385
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE..E- CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk..ld 85
              k l+p+dv +s  + lp+    e g++    ++l+++d+s + W++ +++++++++   lt GW eFv a+g+k+ D v+++  ++
  OMP11637  6 KRLSPKDVEESLAFPLPRILSVEEGEI----FQLQVRDKSDQAWTFSCSIQQHQEMgLALTVGWLEFVGAKGIKADDEVILQgeFM 87
              778899999997778887776555544....68***************998888888***********************994422 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MARISKRLSP KDVEESLAFP LPRILSVEEG EIFQLQVRDK SDQAWTFSCS IQQHQEMGLA  60
LTVGWLEFVG AKGIKADDEV ILQGEFMGSQ DMKLEFLIEV KRKIKLFGKD MWGNLV