PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMP11790

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 40aa MW: 4743.37 Da PI: 12.1633

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMP11790	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.6	4.9e-07	19	40	4	25
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++r +r++kNRe+A rsR+ K+ OMP11790 19 DRRHKRMMKNRESAARSRAGKQ 40 789***************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 40 aa Download sequence
VFPSFPKKRA QENNENSVDR RHKRMMKNRE SAARSRAGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	6e-12	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMP11790