PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G00330.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 388aa    MW: 41679 Da    PI: 8.4981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G00330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.46.9e-052753131255
                      HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  ONIVA01G00330.1 275 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 313
                      7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MMASSSSSSS LCDNHLLQDD LIPWPSMPFA PAPNTFGLNH QWSQPPMLSS STDQLSSYEL  60
ESLQSVESQL AAAAPPTLSP HLQAHQLSTV LMMQELGFQW SSCAAPADQH SIASSTNNNS  120
NVMMNEEELR PRPDQSLISN PRSCSATTLL PPPHLHLDGA VLPSINVSRL QKLAAGDEPP  180
QICCKRQAAA AAVVGHSSIR DEHVPCPYAG PPAHLIQGPS NTLQMKRNTN AAAQGRGGRH  240
GSSTEHRSST ALPPSSKKPR LESHSSSMLP SFKVRKEKLG DRIAALQQLV SPFGKTDTAS  300
VLMEAIGYIK FLQDQVETLS GPYLRSSKNS KKLACRAAQQ QRKGTSNGGD AAAKLDLRSR  360
GLCLVPLSCT SYVTNENGVW PPPNFRGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-46bHLH family protein