PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G00780.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 290aa    MW: 30143.8 Da    PI: 7.834
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G00780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.4e-09207250755
                      HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ + RR+ri +++  L++l+P+      +K++ +++LekA++Y+k Lq
  ONIVA01G00780.1 207 AAAKVRRERISERLKVLQDLVPNG-----TKVDLVTMLEKAINYVKFLQ 250
                      56699*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAAQASSKRG MLLPREAVLY DDEPSMPLEI LGYHGNGVGG GGCVDADYYY SWSGSSSSSS  60
SSVLSFDQAA VGGGGGGCAR QLAFHPGGDD DDCAMWMDAA AGAMVENTSV VAGGGNNYCH  120
RLQFHGGAAG FGLASPGSSV VDNGLEIHES NVSKPPPPAA KKRACPSGEA RAAGKKQCRK  180
GSKPNKAASS SSPSPSPSPN KELPQSAAAK VRRERISERL KVLQDLVPNG TKVDLVTMLE  240
KAINYVKFLQ LQVKVLATDE FWPAQGGKAP ELSQVKDALD AILSSQHPNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.14e-46bHLH family protein