PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G06360.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 217aa    MW: 22510 Da    PI: 7.5561
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G06360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.9e-30104162159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYG+K vk+s++pr+YYrC+ agC vkk+ver+ +dp++v++tY g Hnh 
  ONIVA01G06360.1 104 LDDGFKWRKYGKKAVKSSPNPRNYYRCSAAGCGVKKRVERDGDDPRYVVTTYDGVHNHA 162
                      59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAASLGLCHE TSYAYSYPAS NTSSSLCFPP LMADHIVDGG GGCSFGEFLE LGHSVYSLPL  60
PPPPSQPVVV AGGNNDQYGV SSSSAAAATT SRIGFRTRSE VEVLDDGFKW RKYGKKAVKS  120
SPNPRNYYRC SAAGCGVKKR VERDGDDPRY VVTTYDGVHN HATPGCVGGG GHLPYPTSAA  180
PAWSVPPAAA SPPPAHAQAW GAPLHAAAAA HSSESSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.14e-38WRKY family protein