PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G07100.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 67aa    MW: 7096.96 Da    PI: 10.3563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G07100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.7e-05219825
                     HHHHHHHHHHHHHHHHHC CS
              HLH  8 rErrRRdriNsafeeLre 25
                      Er+RR+++N +f  L++
  ONIVA01G07100.1  2 SERKRREKLNGSFVALQS 19
                     6*************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MSERKRREKL NGSFVALQSR PYVLPPGSKL ERQDVVDTDQ SKGVREVSRV KAVGAGGEEP  60
GAGGAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
138ERKRRE
249RKRREK