PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G07150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 219aa    MW: 23564.7 Da    PI: 4.4548
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G07150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.5e-1396140554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      + ++Er RR+r+N++++ Lr ++Pk      +K++Ka+i++ A+ +I +L
  ONIVA01G07150.1  96 NIAMERDRRKRLNEKLFALRAVVPKI-----TKMDKASIVRDAIAHIEKL 140
                      6789*********************7.....7***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MEAAADMGVL LDLYWHTPHI FDLAVADSLL MDGFGSGMYG PAAAPATPAM VEKEYDESLS  60
ELYAYTSQSR YADSSSPDVV NLCSTAVASA AASSKNIAME RDRRKRLNEK LFALRAVVPK  120
ITKMDKASIV RDAIAHIEKL HEEERQLLDE ISVLQSAAAV AATVVEDVDD SGVTMPSMKK  180
LRSTPPLDGG GGALRVASSP PLQILEVETK ETEDFYGPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.32e-20bHLH family protein