PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G10240.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 237aa MW: 27018.2 Da PI: 4.8784

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G10240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.8e-09	43	74	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT +E +l +++k++G ++Wk + + g ONIVA01G10240.1 43 KGPWTSWENSILEKYIKKHGERNWKIVQKNTG 74 79************************999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MHRSGSDSDS DKAHWYMSNS DDESFVDKDK DCRRGTVALL LKKGPWTSWE NSILEKYIKK 60 HGERNWKIVQ KNTGLLSNIL DRRLASKDYD SIEDQRNRIE VAAEYEISLP VLKTTNNDIF 120 PSASIFANHG ISNGNLSALS TTDALQMELP LIQFDPNNQF IYSRAYATHL TNLALLNDQS 180 EELLNHIDVL NYVVMKEELS RGSLSPTINM PCEATAYSSE LPLCKGYREQ DLDFYTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	1e-11	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G10240.1