PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G11020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 467aa MW: 52391.8 Da PI: 8.1213

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G11020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.9	5e-15	131	210	1	86
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k +++s+v + +l lp f++++ +k +++++lede+g+ + ++ +++++ l++GW++F+ +++k+gD+vvF+l++ ONIVA01G11020.1 131 FVKHMLHSHVVSGFWLGLPAGFCNKFL-PK-HDTDIVLEDENGNNHNTNY--LGGKQG--LSAGWRGFAINHDIKVGDVVVFELVH 210 899******************8884.33.5679***********..888888..9********************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MAIDQPIKKR GRPPGSKNTK NKMEQKMELV HQRLALLDSS SGSDRDDDIG PRMLMPKEVE 60 NEQRTVPGIP QTCNTQNTSN GRTNTTEVPV KGQNKCASYL PKKSSVQAFC GSAMKRAQEI 120 QTKLPAEHPS FVKHMLHSHV VSGFWLGLPA GFCNKFLPKH DTDIVLEDEN GNNHNTNYLG 180 GKQGLSAGWR GFAINHDIKV GDVVVFELVH IIRDKNISPT DRAPGLKSFY ACKKRKISKE 240 ATDNATKPKE DPETTRVSSK VAHDDTQNLV HEAIDGIRFS DSEMSFDDVM SYSNFNIVVD 300 GLVIDCKFPD HQRRTYYELC CAQKSFLHRH LLRQLSLTLV VGVIMETINI AEGIRACGAG 360 TSSQEDFLIW KKTLQSFDLL GMNVAFLLKR VDDLLGLPEQ PRDPSECSKY NELKLERSRA 420 GEKVKALESM MLTVKDVLKK IDAEMEEMES SVRNHDIALR KIATAPW

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MAIDQPIKKR GRPPGSKNTK NKMEQKMELV HQRLALLDSS SGSDRDDDIG PRMLMPKEVE  60
NEQRTVPGIP QTCNTQNTSN GRTNTTEVPV KGQNKCASYL PKKSSVQAFC GSAMKRAQEI  120
QTKLPAEHPS FVKHMLHSHV VSGFWLGLPA GFCNKFLPKH DTDIVLEDEN GNNHNTNYLG  180
GKQGLSAGWR GFAINHDIKV GDVVVFELVH IIRDKNISPT DRAPGLKSFY ACKKRKISKE  240
ATDNATKPKE DPETTRVSSK VAHDDTQNLV HEAIDGIRFS DSEMSFDDVM SYSNFNIVVD  300
GLVIDCKFPD HQRRTYYELC CAQKSFLHRH LLRQLSLTLV VGVIMETINI AEGIRACGAG  360
TSSQEDFLIW KKTLQSFDLL GMNVAFLLKR VDDLLGLPEQ PRDPSECSKY NELKLERSRA  420
GEKVKALESM MLTVKDVLKK IDAEMEEMES SVRNHDIALR KIATAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-30	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G11020.1