PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G11020.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 445aa MW: 49944.9 Da PI: 7.0458

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G11020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47	4.6e-15	109	188	1	86
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k +++s+v + +l lp f++++ +k +++++lede+g+ + ++ +++++ l++GW++F+ +++k+gD+vvF+l++ ONIVA01G11020.2 109 FVKHMLHSHVVSGFWLGLPAGFCNKFL-PK-HDTDIVLEDENGNNHNTNY--LGGKQG--LSAGWRGFAINHDIKVGDVVVFELVH 188 899******************8884.33.5679***********..888888..9********************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MEQKMELVHQ RLALLDSSSG SDRDDDIGPR MLMPKEVENE QRTVPGIPQT CNTQNTSNGR 60 TNTTEVPVKG QNKCASYLPK KSSVQAFCGS AMKRAQEIQT KLPAEHPSFV KHMLHSHVVS 120 GFWLGLPAGF CNKFLPKHDT DIVLEDENGN NHNTNYLGGK QGLSAGWRGF AINHDIKVGD 180 VVVFELVHII RDKNISPTDR APGLKSFYAC KKRKISKEAT DNATKPKEDP ETTRVSSKVA 240 HDDTQNLVHE AIDGIRFSDS EMSFDDVMSY SNFNIVVDGL VIDCKFPDHQ RRTYYELCCA 300 QKSFLHRHLL RQLSLTLVVG VIMETINIAE GIRACGAGTS SQEDFLIWKK TLQSFDLLGM 360 NVAFLLKRVD DLLGLPEQPR DPSECSKYNE LKLERSRAGE KVKALESMML TVKDVLKKID 420 AEMEEMESSV RNHDIALRKI ATAPW

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MEQKMELVHQ RLALLDSSSG SDRDDDIGPR MLMPKEVENE QRTVPGIPQT CNTQNTSNGR  60
TNTTEVPVKG QNKCASYLPK KSSVQAFCGS AMKRAQEIQT KLPAEHPSFV KHMLHSHVVS  120
GFWLGLPAGF CNKFLPKHDT DIVLEDENGN NHNTNYLGGK QGLSAGWRGF AINHDIKVGD  180
VVVFELVHII RDKNISPTDR APGLKSFYAC KKRKISKEAT DNATKPKEDP ETTRVSSKVA  240
HDDTQNLVHE AIDGIRFSDS EMSFDDVMSY SNFNIVVDGL VIDCKFPDHQ RRTYYELCCA  300
QKSFLHRHLL RQLSLTLVVG VIMETINIAE GIRACGAGTS SQEDFLIWKK TLQSFDLLGM  360
NVAFLLKRVD DLLGLPEQPR DPSECSKYNE LKLERSRAGE KVKALESMML TVKDVLKKID  420
AEMEEMESSV RNHDIALRKI ATAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-30	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G11020.2