PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G11810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Nin-like
Protein Properties Length: 306aa    MW: 32353.4 Da    PI: 8.4577
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G11810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK72.36.5e-234086450
           RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                     ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rk+ 
  ONIVA01G11810.1 40 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRSHGIVRWPYRKLV 86
                     6899*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MASTAQPQQQ QEQQPVAAAA VPTPAPPASE AQPQKPTRVS LSYEEISKLF SLPIAEAASI  60
LGVCTSVLKR ICRSHGIVRW PYRKLVSGKS GDDTKNAERE KAKGLLEISK VAKQKALSAS  120
GLSTVSPGAF QGVAKSQQGS SKAGQVSPPG KQNVLGGSAI LSYGTQTKGI PTYMDDFKYG  180
FPSSGLSLQT MKWWGTDSHT ETTPAKDDNG EAPESANEAS KGMTDDELDW GADEAEAEAD  240
ADSAITTEPS AQLCSLRRKA VDDGRKLLTG KSCGGLELCR LNKRQKMALA QVFGASLPEQ  300
LRSKLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-10Nin-like family protein