PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G14500.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 403aa MW: 43307 Da PI: 7.161

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G14500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.1	2.7e-07	205	247	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + E++RR r+ ++++ L l+P++ +K + a++ A+eYI++L ONIVA01G14500.1 205 KKEKQRRLRLTEKYNALMLLIPNR-----TKEDRATVISDAIEYIQEL 247 57*******************9.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MPATSLSLSL VQASEKARQQ PSARKMYHPQ CELLMPLESL EMDVGQSHLA AAVAAAMPGE 60 LNFHLLHSLD AAAAAASSTP ASASSQPTVD YFFGGADQQQ PPPAAVQYDQ LAAPHHHQTV 120 AMLRDYYGGH YPPAAAAAAA TEAYFRGGPR TAGSSSLVFG PADDESAFMV GPFESSPTPR 180 SGGGRKRSRA TAGFHGGGPA NGVEKKEKQR RLRLTEKYNA LMLLIPNRTK EDRATVISDA 240 IEYIQELGRT VEELTLLVEK KRRRREMQGD VVDAAASSVV AGMDQAAESS EGEVMAAAMG 300 AVAPPPRQAP IRSTYIQRRS KETFVDVRIV EDDVNIKLTK RRRDGCLAAA SRALDDLRLD 360 LVHLSGGKIG DCHIYMFNTK IHPGSPVFAS AVASRLIEVV DEY

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MPATSLSLSL VQASEKARQQ PSARKMYHPQ CELLMPLESL EMDVGQSHLA AAVAAAMPGE  60
LNFHLLHSLD AAAAAASSTP ASASSQPTVD YFFGGADQQQ PPPAAVQYDQ LAAPHHHQTV  120
AMLRDYYGGH YPPAAAAAAA TEAYFRGGPR TAGSSSLVFG PADDESAFMV GPFESSPTPR  180
SGGGRKRSRA TAGFHGGGPA NGVEKKEKQR RLRLTEKYNA LMLLIPNRTK EDRATVISDA  240
IEYIQELGRT VEELTLLVEK KRRRREMQGD VVDAAASSVV AGMDQAAESS EGEVMAAAMG  300
AVAPPPRQAP IRSTYIQRRS KETFVDVRIV EDDVNIKLTK RRRDGCLAAA SRALDDLRLD  360
LVHLSGGKIG DCHIYMFNTK IHPGSPVFAS AVASRLIEVV DEY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	190	GRKRSRA
2	260	265	KKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	1e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G14500.1