PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G18160.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 248aa    MW: 27268.4 Da    PI: 8.0614
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G18160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM317.1e-10592033128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev..ikev.diykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknra.......tksg 81 
                       Gf+  Pt +elv ++L+++++g ++   +v  i    d   + P dL +    +++ + + e ++F++r++  + + r++ a        + g
  ONIVA01G18160.1  59 TGFQDTPTVDELVLRHLRPRLRGFHCADGDVpvIGVRdDPAAAAPLDLVArhggAADRR-RgEAFYFVRRRRCRRPNVRRTVAeggggggGAGG 151
                      69999*******************9766565424444699********74334322223.2588999999887765555544456666655589 PP

              NAM  82 yWka..tgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                       Wk+  tg+ k+v++ +  + + k+   fy   +g + ++    Wv+ ey++
  ONIVA01G18160.1 152 LWKQswTGSGKSVTDLGVVVPWSKTCYCFYrrdEGGRLSTFGGGWVLAEYEI 203
                      9**54499*******888888999999***43333444445679******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAISAAAADH SRASPSSAAT QPTTICWRPS KVKEEVEEDG MVVDPPDGAG EASDNLRATG  60
FQDTPTVDEL VLRHLRPRLR GFHCADGDVP VIGVRDDPAA AAPLDLVARH GGAADRRRGE  120
AFYFVRRRRC RRPNVRRTVA EGGGGGGGAG GLWKQSWTGS GKSVTDLGVV VPWSKTCYCF  180
YRRDEGGRLS TFGGGWVLAE YEITEPGTYR RADEEEDDDD YWVLCHVRKT ASNKRKRNRC  240
ERPWLHGL