PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G19770.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 177aa    MW: 18405 Da    PI: 8.3327
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G19770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.5e-063475954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     Er RR+ +   ++eL  llP++     ++ s   i+e+A+ ++ +L
  ONIVA01G19770.1 34 ERARRQTMSRLYDELGALLPNL----PPRASTTRIVEEAIACVGEL 75
                     9********************6....389**********9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAEEDNLALS VVCERSPGTA VEAASGRPPK AGSERARRQT MSRLYDELGA LLPNLPPRAS  60
TTRIVEEAIA CVGELRARTA ELEAYSAVAA AAGRAARDGP AEVVASGKTS CFAVRLRAAR  120
ARPGALTRVL EVFQRHGVAV LAATVARDGE ETAVTVTTAA VAPRVLETIK AEIICAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-07bHLH family protein