PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G22920.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 447aa MW: 49721.7 Da PI: 5.8861

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G22920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.6	5.2e-14	294	341	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f +L++l+P+ + K++Ka+iL +++ Y+k+L+ ONIVA01G22920.1 294 KNHVMSERRRRENLNEMFLTLKSLVPSiD------KVDKASILAETIAYLKELE 341 5899*********************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MELTAEQLLL QRSEQLRELY SSLLSGECAD QQRRRRPVTA LSPEDLGNME WFYMVCMTYA 60 FRPGQWYTSL IYSIISKSFA SNGCAWLCNA QSADSKAFPR KLLAKNASIQ TIVCVPFMNG 120 VLELGTTDPV PEEPNVVNRI TTAFWEFQLL ACSDEPISSG TPSSPSSPLT KETGDANTVL 180 IDDLFLAHSA AGGDQEDHQL GNDLGQQQAA TAMEIDDDMI YSLIRNWDND SSSSWIELLD 240 HVVVSPASCF VPWKRTELDK QAVAGGGEAA QRLLKKAVGG GGAWMNRAAD SSIKNHVMSE 300 RRRRENLNEM FLTLKSLVPS IDKVDKASIL AETIAYLKEL ERRVQELESG KKVSRPPKRK 360 PCSDGAVKEH HHWVLSESQE GTPSNVRVIV MDKDELHLEV HCRWKELMMT RLFDAIKSLR 420 LDVLSVQASA PNGLLGLKIR AKVVSLT

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MELTAEQLLL QRSEQLRELY SSLLSGECAD QQRRRRPVTA LSPEDLGNME WFYMVCMTYA  60
FRPGQWYTSL IYSIISKSFA SNGCAWLCNA QSADSKAFPR KLLAKNASIQ TIVCVPFMNG  120
VLELGTTDPV PEEPNVVNRI TTAFWEFQLL ACSDEPISSG TPSSPSSPLT KETGDANTVL  180
IDDLFLAHSA AGGDQEDHQL GNDLGQQQAA TAMEIDDDMI YSLIRNWDND SSSSWIELLD  240
HVVVSPASCF VPWKRTELDK QAVAGGGEAA QRLLKKAVGG GGAWMNRAAD SSIKNHVMSE  300
RRRRENLNEM FLTLKSLVPS IDKVDKASIL AETIAYLKEL ERRVQELESG KKVSRPPKRK  360
PCSDGAVKEH HHWVLSESQE GTPSNVRVIV MDKDELHLEV HCRWKELMMT RLFDAIKSLR  420
LDVLSVQASA PNGLLGLKIR AKVVSLT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	305	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G22920.1