PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G22980.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 265aa MW: 29193.6 Da PI: 8.8086

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G22980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	5e-14	82	129	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ + K++Ka+iL +++ Y+k+L+ ONIVA01G22980.1 82 KNHVMSERRRREKLNEMFLILKSLVPSiD------KVDKASILSETIAYLKELE 129 5899*********************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MEIDDDVIYS LIRNWDNDSS SSWIELLDHA IVSPASCFVP WKRTELDKEA VAGGEAAQRL 60 LKKVVGGGGA WMNRAAGSCS IKNHVMSERR RREKLNEMFL ILKSLVPSID KVDKASILSE 120 TIAYLKELER RVQELESGKK VSRPAKRKPR SETIISGGGG GGGAGAVKEH HHWVLSESQE 180 GTPSDVRVIV MDKDELHLEV QCRWKELMMT RVFDAIKSLR LDVLSVQASA PDGLLGLKIR 240 AKYASSAAVV PAMISETLRT AVAGY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	93	ERRRRE
2	89	94	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	5e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G22980.1