PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G26820.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 93aa    MW: 10147.1 Da    PI: 8.9476
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G26820.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-091965346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT++  +++ +a + + ++   +W+ +ar+mg  +++++++ ++  
  ONIVA01G26820.1 19 EWTKQQNKQFERALAVYDTDapdRWHNVARYMGGAKSAEEVRRHYER 65
                     7********************************999********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MASSSKASSS SSASAASSEW TKQQNKQFER ALAVYDTDAP DRWHNVARYM GGAKSAEEVR  60
RHYERLQADV EHIEAGGVPF SLGYGATPQA GRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-24MYB_related family protein