PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G27180.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 432aa    MW: 46661 Da    PI: 6.2491
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G27180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.41.7e-2091332128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                        GfrF+P++ee++++yL + ++g++ + +e  i+++d+y + eP+dL  k    +++ + + +fF+  ++ +    + +r++  g+W ++ + 
  ONIVA01G27180.1   9 KLGFRFNPSQEEVITYYLPRLIAGHPPKDTEGyIHRADVYGAdEPRDLAgKyapVARSPNGDRFFFTGCKRVKG---KFSRSAGGGTWVSQSS- 98 
                      67************************6655555*******9869****843443333334478***99998764...7999999*****8866. PP

              NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k++++++g ++g  k + f     + g++tdW+m+ey+l
  ONIVA01G27180.1  99 KDLKNREGIKIGEVKNFRFK----KGGNNTDWLMEEYHL 133
                      888888*************8....567789*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MASLDLLLKL GFRFNPSQEE VITYYLPRLI AGHPPKDTEG YIHRADVYGA DEPRDLAGKY  60
APVARSPNGD RFFFTGCKRV KGKFSRSAGG GTWVSQSSKD LKNREGIKIG EVKNFRFKKG  120
GNNTDWLMEE YHLCGKEAGG VVEPVVCRIY VSPRAAPDSV AHQESAALPP PQELVPPPQE  180
LAPPPYPAAQ APPQAPAPPR QVPVITQQQA PPQKRPAAPV AEPPCATKKM KGAVSAKPMA  240
PQSSVTASAA PPRCAVAPSQ HHPPFQTYPT DPFEPPAPAA SVTQPSVPAT PEQGPAYVPD  300
PADIGMEMDE LMSFLDSTPV DGILPSQLYE YDELAKELED ALQGGGEEDG NDNPPRCATP  360
PPPRPASWPA MAPPPPPHPP ILTFPKDPGG CDKQSQGGYR VLLKDMGDDQ IDQQWLKVSL  420
KDYHHLMKSC KL