PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G33580.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 401aa MW: 44655.1 Da PI: 10.5543

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G33580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.7	3.3e-21	20	119	1	99
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ffkvl + ++rl +p +f++++ +g ke s+ tle +sgr+W v + r++ +++++t+GW +Fv+++ L+e +fvvF++dg ONIVA01G33580.1 20 FFKVL--VGDF-KQRLKIPPNFCKHIpweesrkaKGLKEASMAATLEGPSGRTWLVVI--RRTAEGTFFTSGWPKFVQDQALRELEFVVFRYDG 108 56666..3444.457******888**996666799*************..*******************************9 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++f + +vf++ ONIVA01G33580.1 109 NTRF--TAMVFDR 119 9999..6666665 PP
2	B3	53.5	4.4e-17	292	378	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++ +v s ++++p f ++h ++e ++++l+d+ g++W+v +i ++++r l++GW F++ n L+egD +vF+l+ ef +v++fr ONIVA01G33580.1 292 MSTMHVYYSFMMRFPTGFSRQHL--PRERTDVVLRDPGGKVWSVLYI-PNTRDR--LSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFR 378 6788999999*******9995..345679***********4.444455..9********************9986666..999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MPGAGGKKSP WASGERRPHF FKVLVGDFKQ RLKIPPNFCK HIPWEESRKA KGLKEASMAA 60 TLEGPSGRTW LVVIRRTAEG TFFTSGWPKF VQDQALRELE FVVFRYDGNT RFTAMVFDRT 120 ACEREDLMGG GGGDRPRKKR GRPRTAAASR DAARPKKDSV GKEMVTYRAS PSGGQPLQIV 180 DSSWTPEPGS TAVKNEEDAD ELPVCELPAS SASPPRHVPE GALDADGGAA RRGAAKTRSL 240 QDDLALASIP PSIRRYKGYV SRRRAVATAE RQRATEIAHA FRSPLPYCVI RMSTMHVYYS 300 FMMRFPTGFS RQHLPRERTD VVLRDPGGKV WSVLYIPNTR DRLSRGWCAF ARGNCLEEGD 360 YCVFELVAAA EFRVHIFRVV EPAVPAVRLR RVTVTCGRGP T

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MPGAGGKKSP WASGERRPHF FKVLVGDFKQ RLKIPPNFCK HIPWEESRKA KGLKEASMAA  60
TLEGPSGRTW LVVIRRTAEG TFFTSGWPKF VQDQALRELE FVVFRYDGNT RFTAMVFDRT  120
ACEREDLMGG GGGDRPRKKR GRPRTAAASR DAARPKKDSV GKEMVTYRAS PSGGQPLQIV  180
DSSWTPEPGS TAVKNEEDAD ELPVCELPAS SASPPRHVPE GALDADGGAA RRGAAKTRSL  240
QDDLALASIP PSIRRYKGYV SRRRAVATAE RQRATEIAHA FRSPLPYCVI RMSTMHVYYS  300
FMMRFPTGFS RQHLPRERTD VVLRDPGGKV WSVLYIPNTR DRLSRGWCAF ARGNCLEEGD  360
YCVFELVAAA EFRVHIFRVV EPAVPAVRLR RVTVTCGRGP T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	9e-21	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G33580.1