PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G35550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 212aa    MW: 21145.8 Da    PI: 11.0784
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G35550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20126177256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      +y+GVr+++ +g+++AeIrdp+  g  +r +lg+fgtaeeAa+a+++a+ +++g+
  ONIVA01G35550.1 126 HYRGVRRRP-WGKYAAEIRDPTRHG--ARLWLGTFGTAEEAAAAYDRAAFRMRGA 177
                      7********.**********96544..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSLSLGFSAG AGAGADRLAA APALQAAGAL PPRVDVSLSL ARAANGQPSS YLPLNENDSL  60
DMVLFDVLRE ASAVAALSSS SSSSPELGAR TTAPVVAGHP AGRKGGGGGG GGRGAAARGG  120
AAGGRHYRGV RRRPWGKYAA EIRDPTRHGA RLWLGTFGTA EEAAAAYDRA AFRMRGAKAL  180
LNFPPAVPGD GARRGAAAAA KQVGMSDGEC VI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104113KGGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.14e-12ERF family protein