PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G39370.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 131aa    MW: 14677.1 Da    PI: 7.9696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G39370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-191768256
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                     +y+GVr+++ +g+++AeIrd s    +  r++lg+f+taeeAa+a+++ + +++g+
  ONIVA01G39370.1 17 KYRGVRRRP-WGKFAAEIRDSSR---HgVRVWLGTFDTAEEAARAYDRSAYSMRGA 68
                     8********.**********432...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDHHQQQQQQ EGELVAKYRG VRRRPWGKFA AEIRDSSRHG VRVWLGTFDT AEEAARAYDR  60
SAYSMRGANA VLNFPADAHI YARQLHNNNA AAGSSSSSSA AAAAARPPPI EFEYLDDHVL  120
QEMLRDHTTN K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-33ERF family protein