PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G40340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 287aa    MW: 31399.4 Da    PI: 6.2817
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G40340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.59.9e-2271131359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                      Dg+ WrKYGqK++k+s fpr YYrC+++   +C + k v++++ +dp +  +tY+ eH+++
  ONIVA01G40340.1  71 DGHLWRKYGQKNIKDSAFPRLYYRCSYRedrQCLASKLVQQENdDDPPLYRVTYTYEHTCN 131
                      9**************************99999*******987516899***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MASPRLKREQ SFDFEEASAQ EAVGSASASY SPPGGGGVFG ISPPESSPRD GRKRRKDRPS  60
LVKHTFTPHF DGHLWRKYGQ KNIKDSAFPR LYYRCSYRED RQCLASKLVQ QENDDDPPLY  120
RVTYTYEHTC NTTPVPTPDV VAEQPPPGAA GDAYLLRFGS SAGGGGGGAH QQQTERERQQ  180
QNTARRRPFM MLSFDSSSSH QLHEQPHAFP PDGQLPATAA AASPSSFTAA EALAAPPPAP  240
PLTTTMNDGG DLFSTWDALR YGLDYDHGHL GNHVYLPDDC NGGDDNY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15257RKRRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.11e-18WRKY family protein