PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G40390.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 277aa    MW: 29279.7 Da    PI: 5.4391
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G40390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.32.3e-21113174258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S..SST.TEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa..edp.kvveitYegeHnh 58 
                       Dg+ WrKYGqKe++g ++pr YYrC+++  gC ++++v++s+  +dp  +++i Y geH++
  ONIVA01G40390.1 113 TDGFIWRKYGQKEINGCKHPRLYYRCAFRgqGCLATRRVQQSQsqDDPaAAFVIAYYGEHTC 174
                      6***************************9999********87621455257899******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAMLGSSSAV VLELMTMGYQ SAAYLGELLR AASPAQAGDE QQELAAEILR CCDRVIAKLN  60
RGGATGATTG KKRKAAESAA AAAVTSPSLP VTPTKRRARG AEAVREVRSG TTTDGFIWRK  120
YGQKEINGCK HPRLYYRCAF RGQGCLATRR VQQSQSQDDP AAAFVIAYYG EHTCGGDAAA  180
CRDGELMPPA VINSGASSFA AAWNMASREP ASSLAVERRS CDGDAPSETS QGWSPSFSSE  240
VELDVVGFDL AGADSSASPV WEFLNGSFDW ESVINSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.18e-16WRKY family protein