PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G41030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 223aa    MW: 24126.1 Da    PI: 6.4469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G41030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-105797954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r RR+ri ++f  Lr+l+P        K++ +++Le+A++Y+k L
  ONIVA01G41030.1 57 ARERRHRISDRFRVLRSLVPGG-----SKMDTVSMLEQAIHYVKFL 97
                     699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDPYHYENMH DPRGFPIHPQ PYHLHPTAGG LGEGRMRGGG RRRPGAKLST DPQSVAARER  60
RHRISDRFRV LRSLVPGGSK MDTVSMLEQA IHYVKFLKAQ VTLHQAALVQ HEEGCQHADV  120
AAAFAAADAD LALELNHRHG GAGDDDAGMT TLEMAPMQEA VGYGDGPAHQ MMQQALDPAG  180
QLMMGGAHQL PPLPCCVFVQ ETDPSCYSVC NVHGEESGAQ GSY