PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G41260.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NF-YB

Protein Properties

Length: 158aa MW: 17010.2 Da PI: 7.5036

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G41260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.6	2.4e-55	18	111	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrkting+dll+a++tlGfe+yv+plk+yl+kyre + ONIVA01G41260.1 18 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREGD 111 69*****************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MADAGHDESG SPPRSGGVRE QDRFLPIANI SRIMKKAVPA NGKIAKDAKE TLQECVSEFI 60 SFVTSEASDK CQKEKRKTIN GEDLLFAMGT LGFEEYVDPL KIYLHKYREG DSKLSSKAGD 120 GSVKKDTIGP HSGASSSSAQ GMVGAYTQGM GYMQPQVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	7e-66	NF-YB family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G41260.1