PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G41940.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 257aa    MW: 26608.8 Da    PI: 5.5854
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G41940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.53.5e-29140193155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r++WtpeLH+rFveav++L G++ A+Pk+i++lm+v+gLt+e+v+SHLQkYRl
  ONIVA01G41940.2 140 KARMVWTPELHHRFVEAVAHL-GEKGAVPKAIVRLMNVDGLTRENVASHLQKYRL 193
                      68*******************.9*******************************8 PP
2Myb_DNA-binding47.15.6e-15142192148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+e++ ++v+av+ lG +   +k+I r m+  g+t++++ s++qky+
  ONIVA01G41940.2 142 RMVWTPELHHRFVEAVAHLGEKgaVPKAIVRLMNvDGLTRENVASHLQKYR 192
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MLSARGGRPH DADAPLPSSS SSSSSSSSSS PSRRMVDAAA ASGDACGRVT EWETGLPAPG  60
EMTPVSHQLV PPALAAAFGI DLAAVGVLLP SPSVDSPVSH LFFPVDEDDD EDEEGEGEGG  120
NDDAPAAAAA GGGGGRCGKK ARMVWTPELH HRFVEAVAHL GEKGAVPKAI VRLMNVDGLT  180
RENVASHLQK YRLYLKRTRV AATPPPSPPP PPPPPPPLPP AMYVPCFAAK PPLDAANRSD  240
SPPSRTSDAT TKQCYSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.17e-29G2-like family protein