PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G44590.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 191aa    MW: 19911.1 Da    PI: 7.9777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G44590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-161969155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++y+GVr+++ +g+Wv+eIr+p +   r r +lg++ t+e Aa a++ a   l+g
  ONIVA01G44590.1 19 CRYRGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATPEAAAVAHDTAVYFLRG 69
                     78*****777.**********943...5*********************999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSRAECGGGG GGGEEEERCR YRGVRRRRWG KWVSEIRVPG TRERLWLGSY ATPEAAAVAH  60
DTAVYFLRGG AGDGGGGGAT LNFPERAAAT YGGGVARLSP RSVQRVASDA GMAADAQLVA  120
ARDAAPAPAP ATAYARPDHC AGATTARHDE LARRGMYGAH AHAAGANART SGERQLVCAE  180
EISVDDMEIL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.14e-24ERF family protein