PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G46510.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 727aa MW: 75885.3 Da PI: 7.0184

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G46510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	537	633	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 +kvl++sdv+++gr+vlpkk ae h ++k++ ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fv++n+L+egDf+v++ ++ ++ ONIVA01G46510.1 537 QKVLKQSDVGSLGRIVLPKKEAEVHlpELKTRDGVSIPMEDiGTSQVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNELQEGDFIVIY--SDiKS 627 79***********************999*******7777***99777777777777.******************..66688 PP E..EEE CS B3 90 felvvk 95 ++++++ ONIVA01G46510.1 628 GKYLIR 633 877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MDASAGSSAP HSHGNPGKQG GGGGGGGRGK APAAEIRGEA ARDDVFFADD TFPLLPDFPC 60 LSSPSSSTFS SSSSSNSSSA FTTAAGAGCG GEPSEPASAA DGFGELADID QLLDLASLSV 120 PWEAEQPLFP DDVGMMIEDA MSGQPHQADD CTGDGDTKAV MEAAGGGDDA GDACMEGSDA 180 PDDLPAFFME WLTSNREYIS ADDLRSIRLR RSTIEAAAAR LGGGRQGTMQ LLKLILTWVQ 240 NHHLQKKRPR TATDDGAASS DPQLPSPGAN PGYEFPSGGQ EMGSAAATSW MPYQAFTPPA 300 AYGGDAMYPG AAGPFPFQQS CSKSSVVVSS QPFSPPTAAA AGDMHASGGG NMAWPQQFAP 360 FPVSSTSSYT MPSVVPPPFT AGFPGQYSGG HAMCSPRLAG VEPSSTKEAR KKRMARQRRL 420 SCLQQQRSQQ LNLSQIHISG HPQEPSPRAA HSAPVTPSSA GCRSWGIWPP AAQIIQNPLS 480 NKPNPPPATS KQPKPSPEKP KPKPQAAATA GAESLQRSTA SEKRQAKTDK NLRFLLQKVL 540 KQSDVGSLGR IVLPKKEAEV HLPELKTRDG VSIPMEDIGT SQVWNMRYRF WPNNKSRMYL 600 LENTGDFVRS NELQEGDFIV IYSDIKSGKY LIRGVKVRRA AQEQGNSSGA VGKHKHGSPE 660 KPGVSSNTKA AGAEDGTGGD DSAEAAAAAA AGKADGGGCK GKSPHGVRRP RQEAAAAASM 720 SQMAVSI

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MDASAGSSAP HSHGNPGKQG GGGGGGGRGK APAAEIRGEA ARDDVFFADD TFPLLPDFPC  60
LSSPSSSTFS SSSSSNSSSA FTTAAGAGCG GEPSEPASAA DGFGELADID QLLDLASLSV  120
PWEAEQPLFP DDVGMMIEDA MSGQPHQADD CTGDGDTKAV MEAAGGGDDA GDACMEGSDA  180
PDDLPAFFME WLTSNREYIS ADDLRSIRLR RSTIEAAAAR LGGGRQGTMQ LLKLILTWVQ  240
NHHLQKKRPR TATDDGAASS DPQLPSPGAN PGYEFPSGGQ EMGSAAATSW MPYQAFTPPA  300
AYGGDAMYPG AAGPFPFQQS CSKSSVVVSS QPFSPPTAAA AGDMHASGGG NMAWPQQFAP  360
FPVSSTSSYT MPSVVPPPFT AGFPGQYSGG HAMCSPRLAG VEPSSTKEAR KKRMARQRRL  420
SCLQQQRSQQ LNLSQIHISG HPQEPSPRAA HSAPVTPSSA GCRSWGIWPP AAQIIQNPLS  480
NKPNPPPATS KQPKPSPEKP KPKPQAAATA GAESLQRSTA SEKRQAKTDK NLRFLLQKVL  540
KQSDVGSLGR IVLPKKEAEV HLPELKTRDG VSIPMEDIGT SQVWNMRYRF WPNNKSRMYL  600
LENTGDFVRS NELQEGDFIV IYSDIKSGKY LIRGVKVRRA AQEQGNSSGA VGKHKHGSPE  660
KPGVSSNTKA AGAEDGTGGD DSAEAAAAAA AGKADGGGCK GKSPHGVRRP RQEAAAAASM  720
SQMAVSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-61	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G46510.1