PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G46800.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 692aa MW: 73837.3 Da PI: 9.31

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G46800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	2.9e-09	406	453	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq ONIVA01G46800.1 406 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 453 79**********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MTEILSPTKT ILLADCSSKK AHAFNPRKGG GCKDLQQQQQ QLVLLFHSFT VPPLFLALSR 60 TRKAPAFTLS PLAFPHPRRS GIWWLLASRV SFAGLGRSWE LGNSGGLVGF RGELRQIFEM 120 NCGPPDQLPP ATAPSCFLNL NWDQSMDAAA GGHLDPALSS MVSSPASNST GALHGISPQP 180 HYGGGTPLSS PPKLNLSMMG QFHHYAAPPQ VGGGGGGGGG LPILENLMPM GHLDQFLADP 240 GFAERAARLS GFDARGGGGG GGYGGAGPAQ FGLPDAGAAG ASKEMELGNT RDESSVSDPA 300 PGGAEIPPKG ASDGNARKRK ASGKGKGKDS PMSTSAAKED SSGKRCKSTE ESNAAAEENS 360 GKGKAAQSNS ENGGGKKQGK DSSSKPPEPP KDYIHVRARR GEATDSHSLA ERVRREKISQ 420 RMKLLQDLVP GCNKVVGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQL DFNNLPNLLA 480 KDMHQSCSPL QSSHFPLETS GAPLPYINQP QQGNPLGCGL TNGMDNQGSM HPLDPAFCRP 540 MGSHHPFLNG VSDAASQVGA FWQDDLQSVV QMDMGQSQEI ATSSNSYNVL EGSENKLNFR 600 ICLSQKRVHM KIQDYLTASP ADFFSTISMG IDNVMRYKKE TALQQMRRSH GKKRGAKGET 660 GTVHIHSHKQ SIIKPCLRLL ADNFYSRRDI QS

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MTEILSPTKT ILLADCSSKK AHAFNPRKGG GCKDLQQQQQ QLVLLFHSFT VPPLFLALSR  60
TRKAPAFTLS PLAFPHPRRS GIWWLLASRV SFAGLGRSWE LGNSGGLVGF RGELRQIFEM  120
NCGPPDQLPP ATAPSCFLNL NWDQSMDAAA GGHLDPALSS MVSSPASNST GALHGISPQP  180
HYGGGTPLSS PPKLNLSMMG QFHHYAAPPQ VGGGGGGGGG LPILENLMPM GHLDQFLADP  240
GFAERAARLS GFDARGGGGG GGYGGAGPAQ FGLPDAGAAG ASKEMELGNT RDESSVSDPA  300
PGGAEIPPKG ASDGNARKRK ASGKGKGKDS PMSTSAAKED SSGKRCKSTE ESNAAAEENS  360
GKGKAAQSNS ENGGGKKQGK DSSSKPPEPP KDYIHVRARR GEATDSHSLA ERVRREKISQ  420
RMKLLQDLVP GCNKVVGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQL DFNNLPNLLA  480
KDMHQSCSPL QSSHFPLETS GAPLPYINQP QQGNPLGCGL TNGMDNQGSM HPLDPAFCRP  540
MGSHHPFLNG VSDAASQVGA FWQDDLQSVV QMDMGQSQEI ATSSNSYNVL EGSENKLNFR  600
ICLSQKRVHM KIQDYLTASP ADFFSTISMG IDNVMRYKKE TALQQMRRSH GKKRGAKGET  660
GTVHIHSHKQ SIIKPCLRLL ADNFYSRRDI QS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-57	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G46800.1