PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G48030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 166aa    MW: 18154.4 Da    PI: 5.3046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G48030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-192170355
              AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++GVr ++ +g+++AeIrd + ng   r++lg+f++aeeAa a+++a+ +++g
  ONIVA01G48030.1 21 FRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEEAALAYDQAAFAMRG 70
                     79******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MDAHGQEEEE EPMQVQQQQA FRGVRKRPWG KFAAEIRDST RNGVRVWLGT FDSAEEAALA  60
YDQAAFAMRG SAAVLNFPME QVRRSMDMSL LQEGASPVVA LKRRHSMRAA AAGRRRKSAA  120
PAPADQEGGG GVMELEDLGP DYLEELLAAS QPIDITCCTS PSHHSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102117KRRHSMRAAAAGRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-31ERF family protein