PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G48650.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 421aa MW: 44259.1 Da PI: 6.3934

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G48650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	1e-11	227	269	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L ONIVA01G48650.1 227 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 269 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MASLLGLLFS SLLFSERCEA RRRARSGSEV AMDEAEAAAA AAKMDELAGG GGGGGGDWSY 60 LAADALAAAS FTAFPFHHHH HHHHRDVLSA STPSSLLLNM DAATAAAMFD FQAAFPSSSV 120 PPPPPTTTAA LPPFHDFASS NPFDDAPPPF LAPPGQKLGF LGPPGGAFGG GMGWDDDDEI 180 EQSVDASSMG VSASLENAAP VAAGGGGGGG GGGGRGKKKG MPAKNLMAER RRRKKLNDRL 240 YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL ESAPSSSLTG PSSASFHPST 300 PTLQTFPGRV KEELCPTSFP SPSGQQATVE VRMREGHAVN IHMFCARRPG ILMSTLRALD 360 SLGLGIEQAV ISCFNGFAMD VFRAEQCRDG PGLGPEEIKT VLLHSAGLQN AMRTDEMRLA 420 I

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MASLLGLLFS SLLFSERCEA RRRARSGSEV AMDEAEAAAA AAKMDELAGG GGGGGGDWSY  60
LAADALAAAS FTAFPFHHHH HHHHRDVLSA STPSSLLLNM DAATAAAMFD FQAAFPSSSV  120
PPPPPTTTAA LPPFHDFASS NPFDDAPPPF LAPPGQKLGF LGPPGGAFGG GMGWDDDDEI  180
EQSVDASSMG VSASLENAAP VAAGGGGGGG GGGGRGKKKG MPAKNLMAER RRRKKLNDRL  240
YMLRSVVPKI SKMDRASILG DAIEYLKELL QRINDLHNEL ESAPSSSLTG PSSASFHPST  300
PTLQTFPGRV KEELCPTSFP SPSGQQATVE VRMREGHAVN IHMFCARRPG ILMSTLRALD  360
SLGLGIEQAV ISCFNGFAMD VFRAEQCRDG PGLGPEEIKT VLLHSAGLQN AMRTDEMRLA  420
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	235	KKKGMPAKNLMAERRRRKK
2	229	236	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-93	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G48650.1