PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G49070.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NF-YB

Protein Properties

Length: 368aa MW: 39446.6 Da PI: 7.6295

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G49070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.6	4.2e-54	33	128	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wa++ lGf+dyv+p++ yl+kyreleg ONIVA01G49070.1 33 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRRYLNKYRELEG 126 89******************************************************************************************** PP NF-YB 96 ek 97 ++ ONIVA01G49070.1 127 DR 128 97 PP
2	NF-YB	141.7	1.8e-44	227	318	3	94
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 qd++lPianv+rimk lP +akisk aket+qec++efisfvt+eas++c+re+rkt+ngdd+++a+ +lG+++y+++++ yl++yre e ONIVA01G49070.1 227 GQDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVNGDDVCHAMRSLGLDHYADAMHRYLQRYREGE 318 69***************************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MADHHGGHHA DGHRRQQQLQ GEAPDQAAAE IIKEQDRLLP IANVGRIMKQ ILPPNAKISK 60 EAKETMQECV SEFISFVTGE ASDKCHKEKR KTVNGDDVCW AFGALGFDDY VDPMRRYLNK 120 YRELEGDRAA AAATSRSGAG AAAGPDHPSS SSSAAAATAG HFMFNAMDRS TDSSRHRDLN 180 FSGFNQLGRL QPMQGLPRAS SSSTSASRDR DGGDGDGGGG GVTMTNGQDN LLPIANVGRI 240 MKDGLPPQAK ISKRAKETIQ ECATEFISFV TGEASERCRR ERRKTVNGDD VCHAMRSLGL 300 DHYADAMHRY LQRYREGEEL AASLNSSSSA AAAAAAAGGS RGGGAIQIDV RAELSIFRSG 360 NNQGRPNN

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MADHHGGHHA DGHRRQQQLQ GEAPDQAAAE IIKEQDRLLP IANVGRIMKQ ILPPNAKISK  60
EAKETMQECV SEFISFVTGE ASDKCHKEKR KTVNGDDVCW AFGALGFDDY VDPMRRYLNK  120
YRELEGDRAA AAATSRSGAG AAAGPDHPSS SSSAAAATAG HFMFNAMDRS TDSSRHRDLN  180
FSGFNQLGRL QPMQGLPRAS SSSTSASRDR DGGDGDGGGG GVTMTNGQDN LLPIANVGRI  240
MKDGLPPQAK ISKRAKETIQ ECATEFISFV TGEASERCRR ERRKTVNGDD VCHAMRSLGL  300
DHYADAMHRY LQRYREGEEL AASLNSSSSA AAAAAAAGGS RGGGAIQIDV RAELSIFRSG  360
NNQGRPNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	4e-55	NF-YB family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G49070.1