PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G50300.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 221aa    MW: 22888.3 Da    PI: 8.9855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G50300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-1775125255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      g+ GVr ++ +gr++AeIrd + ng   r++lg+f tae Aa a+++a+++ +g
  ONIVA01G50300.1  75 GFIGVRKRP-WGRFAAEIRDSTRNG--VRVWLGTFETAEAAAMAYDQAALSARG 125
                      789******.**********44465..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MEQHSHCWYY GGGMAVTAAA GAGAASSTSS ESQPSGYDYE TAGSAEVSAP GGGAGRERAA  60
RKEEGGAGAA AAAAGFIGVR KRPWGRFAAE IRDSTRNGVR VWLGTFETAE AAAMAYDQAA  120
LSARGAAAAL NFPVERVRES LRALALGAAG GSPVLALKGR HSKRKRRKRS ELAGATATAN  180
KTTTTTSATT GGEHKQIVLE LEDLGADYLE ELLWMSEQTS H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168KRKRRK
2163169KRKRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.15e-19ERF family protein