PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G51530.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 219aa    MW: 23817.6 Da    PI: 6.1627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G51530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.7e-154597156
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                     + y+GVr +    rWv+e+r+p     +  +r++lg++ t+e+Aa+a++ a+ +l+ge
  ONIVA01G51530.1 45 PVYRGVRARAGGSRWVCEVREP-----QaqARIWLGTYPTPEMAARAHDVAAIALRGE 97
                     68********9999****9999.....446**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MDTEDTSSAS SSSVSPPSSP GGGHHHRLPP KRRAGRKKFR ETRHPVYRGV RARAGGSRWV  60
CEVREPQAQA RIWLGTYPTP EMAARAHDVA AIALRGERGA ELNFPDSPST LPRARTASPE  120
DIRLAAAQAA ELYRRPPPPL ALPEDPQEGT SGGGATATSG RPAAVFVDED AIFDMPGLID  180
DMARGMMLTP PAIGRSLDDW AAIDDDDDHY HMDYKLWMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-45ERF family protein