PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G01430.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 551aa MW: 58189.4 Da PI: 4.4691

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G01430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	287	330	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 e+Er+RR+++N + +Lr+l+P+ +K++ a+iL A++YI Lq ONIVA02G01430.1 287 EAERKRRKKLNGHLYKLRSLVPNI-----TKMDRASILGDAIDYIVGLQ 330 89*******************7.....7*************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MGRGDHLLMK NSNAAAAAAA VNGGGTSLDA ALRPLVGSDG WDYCIYWRLS PDQRFLEMTG 60 FCCSSELEAQ VSALLDLPSS IPLDSSSIGM HAQALLSNQP IWQSSSEEEE ADGGGGAKTR 120 LLVPVAGGLV ELFASRYMAE EQQMAELVMA QCGGGGAGDD GGGQAWPPPE TPSFQWDGGA 180 DAQRLMYGGS SLNLFDAAAA DDDPFLGGGG DAVGDAAAAA GAWPYAGMAV SEPSVAVAQE 240 QMQHAAGGGV AESGSEGRKL HGGDPEDDGD GEGRSGGAKR QQCKNLEAER KRRKKLNGHL 300 YKLRSLVPNI TKMDRASILG DAIDYIVGLQ KQVKELQDEL EDNHVHHKPP DVLIDHPPPA 360 SLVGLDNDDA SPPNSHQQQP PLAVSGSSSR RSNKDPAMTD DKVGGGGGGG HRMEPQLEVR 420 QVQGNELFVQ VLWEHKPGGF VRLMDAMNAL GLEVINVNVT TYKTLVLNVF RVMVRDSEVA 480 VQADRVRDSL LEVTRETYPG VWPSPQEEDD AKFDGGDGGQ AAAAAAAAGG EHYHDEVSGG 540 YHQHLHYLAF D

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MGRGDHLLMK NSNAAAAAAA VNGGGTSLDA ALRPLVGSDG WDYCIYWRLS PDQRFLEMTG  60
FCCSSELEAQ VSALLDLPSS IPLDSSSIGM HAQALLSNQP IWQSSSEEEE ADGGGGAKTR  120
LLVPVAGGLV ELFASRYMAE EQQMAELVMA QCGGGGAGDD GGGQAWPPPE TPSFQWDGGA  180
DAQRLMYGGS SLNLFDAAAA DDDPFLGGGG DAVGDAAAAA GAWPYAGMAV SEPSVAVAQE  240
QMQHAAGGGV AESGSEGRKL HGGDPEDDGD GEGRSGGAKR QQCKNLEAER KRRKKLNGHL  300
YKLRSLVPNI TKMDRASILG DAIDYIVGLQ KQVKELQDEL EDNHVHHKPP DVLIDHPPPA  360
SLVGLDNDDA SPPNSHQQQP PLAVSGSSSR RSNKDPAMTD DKVGGGGGGG HRMEPQLEVR  420
QVQGNELFVQ VLWEHKPGGF VRLMDAMNAL GLEVINVNVT TYKTLVLNVF RVMVRDSEVA  480
VQADRVRDSL LEVTRETYPG VWPSPQEEDD AKFDGGDGGQ AAAAAAAAGG EHYHDEVSGG  540
YHQHLHYLAF D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	296	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	4e-50	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G01430.1