PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G02790.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 753aa MW: 80006.1 Da PI: 6.7287

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G02790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	486	537	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+++le+l+k+Fs+++kdAA++Lgvc+T++KriCRq+GI+RWP+Rki+++ ONIVA02G02790.1 486 AEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKV 537 5899*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MERVVGDFNL LLQRGGAAGE RGSEGGGGGS PGTEEAAAVA VKQRIARALR LYKEAAGDGG 60 GGWMVQVWAP ARDGARRVLA TRGQPFVLAS QCHRLFQYRT VSLTRVFPVG GAAAADEQGL 120 PARAFDATAP EWTPNVQCYG SGEYARISYA LIYDIQGSLA LPILDPDDAS SPLAVFELVT 180 TAPLLRVSGE VANLCNALRA VSLRGAGICN RAAECYSLAV NQIVHRDATR AAMAEVSELL 240 ITVCEAHKLP LAQTWVRCRS CGGGGEDTEK AALTTAGAPF HLAAGADARG FRDACVEHHL 300 QRGQGLVGTA ARAPGGGRLC ADVARCSKDD YPLAHYAGMY GLAGCLVLRA ELSAAAMADA 360 AAATAGDEED CVVLELFLPP DCTGVAEQKA AVDAVSATIK QCSGNLKAIV ISNLDDLFLD 420 TMADGDHQLR HEMDDLGDDQ RCSDEEDLQL LENTNIGELN IHNADQIRNE DPTSQVGKNK 480 TKRGKAEKSV TLEELQKHFS GSLKDAARSL GVCPTTMKRI CRQHGIPRWP FRKISKVNRS 540 LDKMKRVMES VNCSPSPPVA MPAHPALLLP PPPPPPRPCL SSTVGETSSH GSCQAPPSHA 600 KTALRKPPRC GNGDGVVTIK ASHRGDIIRF RVPCSASVAA VKAEVAKRLS LDAGAFDVKY 660 LDDDHQWVLL SCDADFQECL DVVPALPSMP VTGRSGSGAA APVVVRLMVQ EVADNIGKFP 720 QPKDPFLSLM VCNPVGVPVY QCSPWTSVYQ FRM

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MERVVGDFNL LLQRGGAAGE RGSEGGGGGS PGTEEAAAVA VKQRIARALR LYKEAAGDGG  60
GGWMVQVWAP ARDGARRVLA TRGQPFVLAS QCHRLFQYRT VSLTRVFPVG GAAAADEQGL  120
PARAFDATAP EWTPNVQCYG SGEYARISYA LIYDIQGSLA LPILDPDDAS SPLAVFELVT  180
TAPLLRVSGE VANLCNALRA VSLRGAGICN RAAECYSLAV NQIVHRDATR AAMAEVSELL  240
ITVCEAHKLP LAQTWVRCRS CGGGGEDTEK AALTTAGAPF HLAAGADARG FRDACVEHHL  300
QRGQGLVGTA ARAPGGGRLC ADVARCSKDD YPLAHYAGMY GLAGCLVLRA ELSAAAMADA  360
AAATAGDEED CVVLELFLPP DCTGVAEQKA AVDAVSATIK QCSGNLKAIV ISNLDDLFLD  420
TMADGDHQLR HEMDDLGDDQ RCSDEEDLQL LENTNIGELN IHNADQIRNE DPTSQVGKNK  480
TKRGKAEKSV TLEELQKHFS GSLKDAARSL GVCPTTMKRI CRQHGIPRWP FRKISKVNRS  540
LDKMKRVMES VNCSPSPPVA MPAHPALLLP PPPPPPRPCL SSTVGETSSH GSCQAPPSHA  600
KTALRKPPRC GNGDGVVTIK ASHRGDIIRF RVPCSASVAA VKAEVAKRLS LDAGAFDVKY  660
LDDDHQWVLL SCDADFQECL DVVPALPSMP VTGRSGSGAA APVVVRLMVQ EVADNIGKFP  720
QPKDPFLSLM VCNPVGVPVY QCSPWTSVYQ FRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-106	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G02790.1