PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G03810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 328aa    MW: 34828.5 Da    PI: 4.7257
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G03810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.19.2e-17236273136
             GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                      C++Cg +   Tp++Rrgpdg++tLCnaCGl+++ kg++
  ONIVA02G03810.1 236 CHHCGISAasTPMMRRGPDGPRTLCNACGLMWANKGTM 273
                      *****88888*************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSGHHEAKPY QPRRGPAPAD EEAAPAAAAD EAEAEAEVEA MERYEQEQEY EEGEEGEEEE  60
YEGGEGVPMD ADASAAAVAG MDPHGEMVPV AGGEAGGGYP HVASNTLTLS FQGEVYVFES  120
VSAERVQAVL LLLGGRELAP GSGSVPSSSA AYSKKMNFPH RMASLMRFRE KRKERNFDKK  180
IRYTVRKEVA LRMQRNRGQF TSSKSKAEEA TSAITSSEGS PNWGAVEGRP PSAAECHHCG  240
ISAASTPMMR RGPDGPRTLC NACGLMWANK GTMREVTKGP PVPLQIVPAA TNDVQNGIVE  300
ATGVEQHNSA VEEAVSAANG HESQSGVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.29e-65GATA family protein