PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G09840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 252aa    MW: 28248.6 Da    PI: 4.9419
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G09840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.74.6e-36121431128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      +ppGfrF+Ptde+lvv+yL+++++++++ +   i+++d+y+v+Pw+Lp +++++++++ yfF+ +++++    +++r+t sg+Wk t ++k+++
  ONIVA02G09840.1  12 MPPGFRFQPTDEQLVVDYLQRRTAAQPCVT-PDITDIDVYNVDPWQLPaMAMYGSDHDRYFFTMAAREA----QARRTTPSGFWKPTSTKKTIF 100
                      79*************************988.55***************778888999*******99875....7899****************9 PP

              NAM  94 sk...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                      +    ++  + +k+ +vfy      +g++ + +kt+W+mheyrl
  ONIVA02G09840.1 101 VVaggHEVPTAVKRRFVFYlghhqpSGSN-NNNKTSWIMHEYRL 143
                      9976666669*********6554433333.346*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MAMTPQLAFS RMPPGFRFQP TDEQLVVDYL QRRTAAQPCV TPDITDIDVY NVDPWQLPAM  60
AMYGSDHDRY FFTMAAREAQ ARRTTPSGFW KPTSTKKTIF VVAGGHEVPT AVKRRFVFYL  120
GHHQPSGSNN NNKTSWIMHE YRLMNSPRAA VPSSSSVNRL PTDDLTEEMV LCRISNKDLP  180
KPPFIHNGLL QFSSVGLNGD GYNYLILDHL EPPAMEYPNV DIGNVDDAAA ADDDPGDLDE  240
EIDDSMQRNH GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-33NAC family protein