PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G10840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 301aa    MW: 32156.8 Da    PI: 6.3155
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G10840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.52.1e-33161072102
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                      F+ k+y++++d++++ +i w +++nsfvv d+  f++++Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll+
  ONIVA02G10840.1  16 FVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHVSFLRGQTHLLR 100
                      9****************************************************************999.........***************** PP

                      XXXXXXX CS
     HSF_DNA-bind  96 kikrkks 102
                      +i r++s
  ONIVA02G10840.1 101 RIVRRSS 107
                      ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MTTTTTAEGG GGVAPFVAKT YRMVDDPATD GVIAWGRDSN SFVVADPFAF SQTLLPAHFK  60
HSNFSSFVRQ LNTYGFRKVD PDRWEFAHVS FLRGQTHLLR RIVRRSSGGG GAKRKEEAGG  120
CGGGGEAAAG DVDEESAVVA MEVARLRREQ REIEGRVAAM WRRVQETERR PKQMLAFLVK  180
VVGDPQVLRR LVDRDNTNAA PAASNADDAA VHHQVKRPRL LLDSSSTTTT HGDRHLVTAA  240
ADGFYAGGCG PEAAAAAAFV PDDALDFTGL YTGGDGFGNA VVDAGVDDPP AYAFPVVDSG  300
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-55HSF family protein