PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G10940.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

BES1

Protein Properties

Length: 376aa MW: 38854.3 Da PI: 9.567

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G10940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	171.5	4.6e-53	5	166	1	145
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaag 83 gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr ++ k+ +++++ ONIVA02G10940.1 5 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAIME 98 689*****************************************************************554444443323333322233333 PP DUF822 84 ssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa.....asllpvlsvlsl 145 + + p s+l +l s asp++sy++sp+ +ssfps+ s+++i+l +sl+p+l++ls+ ONIVA02G10940.1 99 TKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITLGGGgggegSSLIPWLKTLSS 166 333345556666788889999****99746899*9999999987789999999999999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN 60 EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS 120 PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GGEGSSLIPW LKTLSSAGVG IGGGSSSKFP 180 AHYSYFGGGS ISAPVTPPSG SPPRTPRLKT AAWEEYHHHH AGSVLPPWAT VGASYAYAAS 240 SSLPNSTPPS PRRKVAAAAA AAGGGNDAAA WLAGFQISSA GPSSPTYSLV APPPNPFGAA 300 AAAAGSSSRV MSGACSPVAG GDVQMADAAR REFAFGGEGG KMTGLVKAWE GERIHEECGS 360 DDLELTLGSS MTRGDR

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN  60
EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS  120
PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GGEGSSLIPW LKTLSSAGVG IGGGSSSKFP  180
AHYSYFGGGS ISAPVTPPSG SPPRTPRLKT AAWEEYHHHH AGSVLPPWAT VGASYAYAAS  240
SSLPNSTPPS PRRKVAAAAA AAGGGNDAAA WLAGFQISSA GPSSPTYSLV APPPNPFGAA  300
AAAAGSSSRV MSGACSPVAG GDVQMADAAR REFAFGGEGG KMTGLVKAWE GERIHEECGS  360
DDLELTLGSS MTRGDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	6e-43	BES1 family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G10940.1