PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G12780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 361aa MW: 38258.5 Da PI: 4.7227

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G12780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.7e-31	175	233	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++ tY+geHnh+ ONIVA02G12780.1 175 ADVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRSDPNTFILTYTGEHNHS 233 69***********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEEELCGNNW DLDAVVRLGC CRRRISPAAV AQQVDPFASF LQQGVAMEVA AEKEVGVEAA 60 WSFPELTVRD GGGGGLGRDA DELLKAFCAA FPSSSSSKSS PLPTPPPPPP TQPQPEQQKP 120 VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW 180 RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS 240 LAGTTRNKLP SSSSASAASA QPQPPPPSVV VVGAGGGGAE AAGLSPTTPL RTPSMEEDEE 300 EEEEEELLVE DMEMAGEDEL LFLNGGDDNA ALDGTPMSSL FDIADEPFLP SPWTEPTAAG 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEEELCGNNW DLDAVVRLGC CRRRISPAAV AQQVDPFASF LQQGVAMEVA AEKEVGVEAA  60
WSFPELTVRD GGGGGLGRDA DELLKAFCAA FPSSSSSKSS PLPTPPPPPP TQPQPEQQKP  120
VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW  180
RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS  240
LAGTTRNKLP SSSSASAASA QPQPPPPSVV VVGAGGGGAE AAGLSPTTPL RTPSMEEDEE  300
EEEEEELLVE DMEMAGEDEL LFLNGGDDNA ALDGTPMSSL FDIADEPFLP SPWTEPTAAG  360
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	3e-44	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G12780.1