PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G16090.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 131aa    MW: 15010.3 Da    PI: 10.2273
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G16090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.4e-1036128394
                      EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
               B3   3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       +++++  +k++ + ++k+f  ++      kk++++++++   s+ ++ + +    + +r+ l++GW +F  +ng+++g +++F+++++++ + 
  ONIVA02G16090.1  36 VTTINPTFMKQDKVHFSKQFSMTYialiVRKKTSQIEVRIPGHSSTTMVLHH---STEKRFNLKSGWTHFPTSNGIQVGTICIFHFHQTNQLQA 126
                      67789999999*********99999999666778888888887777777777...5666899***********************988777666 PP

                      EE CS
               B3  93 vv 94 
                      ++
  ONIVA02G16090.1 127 TI 128
                      65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MKCASAPGRD INLSTELKDY IKDIAQFLHP SNKFYVTTIN PTFMKQDKVH FSKQFSMTYI  60
ALIVRKKTSQ IEVRIPGHSS TTMVLHHSTE KRFNLKSGWT HFPTSNGIQV GTICIFHFHQ  120
TNQLQATIDV L