PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G16710.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 395aa MW: 43291.1 Da PI: 6.7822

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G16710.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15	4.5e-05	57	141	1	54
CHHHHHHHHHHHHHHHH....HHHHHHHCTSCC.C.............................TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriN....safeeLrellPk.as..........................kapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N saf+ +++ ++ ++ ++++Ka+iL A++ +k+L ONIVA02G16710.2 57 RKVQKADREKMRRDRLNeqgdSAFSPFSTVILAtRCyanvlveiqpeitkqavaplsfpsntDPDRPRNDKATILSDAIQMLKDL 141 5677889********555559******777*********************6666677*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MDPRSSQAQE DGFFHPRDGA CPADSRSSRS LVLAPNSRNS FAGGKTECKT QGSIATRKVQ 60 KADREKMRRD RLNEQGDSAF SPFSTVILAT RCYANVLVEI QPEITKQAVA PLSFPSNTDP 120 DRPRNDKATI LSDAIQMLKD LTSQVNKLKA EYTSLSEEAR ELTQEKNELR DEKVSLKFEV 180 DNLNTQYQQR MRVLYPWTGM EPSVVIGPPL PYPFSVPVPV PVPIPSGAVP MHPQLQAYPY 240 FRNQTSGTVS NPCTPYMAYT QPIHPPTDQL SNQFSAPVQH SSSNQSHSMA QDSRSKSSAL 300 QQVSCRGKHD DFDDVATDLE LKTPGSSAPL QSEIANKDSS SDLKKKKQFI QETKGSSLTE 360 GSSSSSRCSS SGPPDVSNSI EGGSVADDQR STVQT

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MDPRSSQAQE DGFFHPRDGA CPADSRSSRS LVLAPNSRNS FAGGKTECKT QGSIATRKVQ  60
KADREKMRRD RLNEQGDSAF SPFSTVILAT RCYANVLVEI QPEITKQAVA PLSFPSNTDP  120
DRPRNDKATI LSDAIQMLKD LTSQVNKLKA EYTSLSEEAR ELTQEKNELR DEKVSLKFEV  180
DNLNTQYQQR MRVLYPWTGM EPSVVIGPPL PYPFSVPVPV PVPIPSGAVP MHPQLQAYPY  240
FRNQTSGTVS NPCTPYMAYT QPIHPPTDQL SNQFSAPVQH SSSNQSHSMA QDSRSKSSAL  300
QQVSCRGKHD DFDDVATDLE LKTPGSSAPL QSEIANKDSS SDLKKKKQFI QETKGSSLTE  360
GSSSSSRCSS SGPPDVSNSI EGGSVADDQR STVQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G16710.2