PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G17180.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 267aa    MW: 29362.9 Da    PI: 8.8931
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G17180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.7e-1629125194
                      EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS.............-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltledesg.............rsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                      f+k l+psd  ++  +l +p ++++++g        ++led++g             + W +++  +k+ g + ltkGW+ Fv+++gLk+gD++
  ONIVA02G17180.1  29 FEKFLMPSDLCSNtEWLGIPEEHVRKFG--------MMLEDRDGysviffqdgvvpgKLWCFRY--WKSNGVHGLTKGWRCFVREKGLKAGDTI 112
                      89*******9988799********9997........888888888888888889999*******..**************************** PP

                      EEEE-SSSEE..EE CS
               B3  81 vFkldgrsefelvv 94 
                       F + g+ +++l++
  ONIVA02G17180.1 113 SFFR-GSACGRLFI 125
                      *984.336665555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MAASLPLSAA IVGAEESVDK EVLEMEYLFE KFLMPSDLCS NTEWLGIPEE HVRKFGMMLE  60
DRDGYSVIFF QDGVVPGKLW CFRYWKSNGV HGLTKGWRCF VREKGLKAGD TISFFRGSAC  120
GRLFICCRLG TRATFASSST LHHGFSMPPP PARPLVGLES GMLARDVPSL GQARLHDGNQ  180
DGGGAPSRHV PSSGRHVEAQ LSRASSRRKR RTMKHSIPEP MIETPPILES MFLIAAPPAV  240
KCLRLFGVNI YVLPVSSSGQ PKQESSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.19e-20B3 family protein