PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G18870.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 124aa    MW: 14040.7 Da    PI: 6.5375
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G18870.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.31.6e-12242451
              AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                     +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  ONIVA02G18870.2  2 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 42
                     9**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MRGVYFKNMK WQAAIKVDKK QIHLGTVGTQ EEAARLYDRA AFMCGREPNF ELSEEEKKEL  60
QNYTWKDFLD MTRDTITSKK QRKVGLIRRN KTDSLVGQSD GDTEMINGGG SSHSEDGDAE  120
TSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-44ERF family protein