PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G20420.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 245aa    MW: 25569.7 Da    PI: 4.6047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G20420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-183988255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a++ ++g
  ONIVA02G20420.1 39 RYLGVRRRP-WGRYAAEIRDPVT---KERHWLGTFDTAEEAAVAYDRAARTIRG 88
                     588******.**********754...5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDFYFFSSSA PAPEKKTRRR QQQQQQREQE GGGGGNEARY LGVRRRPWGR YAAEIRDPVT  60
KERHWLGTFD TAEEAAVAYD RAARTIRGAA ARTNFAYPDL PPGSSLTPYL SPDLSADDLH  120
RHYYGAGAGA GADTQTAAAA ALPAPAQPAH GGDAQEMAYG GGGGGGQNVG GVFDVVGGGG  180
GAAWCDASEL EFGGYDDAGA SAAAAAVYFE EGYVHSPMFS PMPAADEVAA DGFQLGGSSS  240
SSYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.15e-23ERF family protein